Features

Interactive Circos Plot

interacCircos can display multi-track and interactive Circos plot in a coding-friendly manner.

No Perl or JavaScript experience is required !
Same structure and logic as ggplot2.

10+ Plot type

interacCircos support multiple common types of plot including bubble, chord, heatmap, histogram, line, lollipop, point...
interacCircos also design several plots for popular biological data format including wig, cnv, snp, gene...

10+ Animation and Mouse Event

interacCircos apply opening animation for every plot function. Animation of every plot is highly customizable.
interacCircos also support customizing mouse event and mouse tooltips for plot function.

Compatible with other package

interacCircos use data frame as input, which is compatible with output from other packages

Demo

Chord plot

Chord plot for displaying the relationship between gene, exon, protein, etc.

Heatmap plot

Heatmap plot for displaying the gene expression, probe signal, etc.

Histogram plot

Histogram plot for displaying the gene expression, probe signal, etc.

Link plot

Link plot for displaying the gene fusions, interaction, SV data, etc.

Lollipop plot

Lollipop plot for displaying the somatic mutation, germline variation, etc.

Line plot

Line plot for displaying the gene expression, r2 value, etc.

SNP plot

SNP plot for displaying the SNP density data, GWAS data, etc.

Wig plot

Wig plot for displaying the gene expression data, read depth etc.

Gene plot

Gene plot for displaying the gene profile, transcript profile, RNA profile, etc.